# Mittagsseminar (in cooperation with M. Ghaffari, A. Steger and B. Sudakov)

__Mittagsseminar Talk Information__ | |

**Date and Time**: Thursday, November 22, 2012, 12:15 pm

**Duration**: 30 minutes

**Location**: CAB G51

**Speaker**: Gerth Stølting Brodal (Aarhus University)

## Efficient Algorithms for Computing the Triplet and Quartet Distance Between Trees of Arbitrary Degree

The triplet and quartet distances are distance measures to compare two rooted and two unrooted trees, respectively. The leaves of the two trees should have the same set of n labels. The distances are defined by enumerating all subsets of three labels (triplets) and four labels (quartets), respectively, and counting how often the induced topologies in the two input trees are different. In this paper we present efficient algorithms for computing these distances. We show how to compute the triplet distance in time O(n log n) and the quartet distance in time O(d n log n), where d is the maximal degree of any node in the two trees. Within the same time bounds, our framework also allows us to compute the parameterized triplet and quartet distances, where a parameter is introduced to weight resolved (binary) topologies against unresolved (non-binary) topologies. The previous best algorithm for computing the triplet and parameterized triplet distances have O(n^{2}) running time, while the previous best algorithms for computing the quartet distance include an O(d^{9} n log n) time algorithm and an O(n^{2.688}) time algorithm, where the latter can also compute the parameterized quartet distance. Since d ≤ n, our algorithms improve on all these algorithms.

Upcoming talks | All previous talks | Talks by speaker | Upcoming talks in iCal format (beta version!)

Previous talks by year: 2019 2018 2017 2016 2015 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 2004 2003 2002 2001 2000 1999 1998 1997 1996

Information for students and suggested topics for student talks

Automatic MiSe System Software Version 1.4803M | admin login